- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x EGC: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 7 residues within 4Å:- Chain A: D.117, D.118, G.119, I.167
- Chain B: L.12, Q.13, V.16
No protein-ligand interaction detected (PLIP)EDO.3: 4 residues within 4Å:- Chain A: H.233, S.275, G.276
- Chain B: F.71
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Water bridges: B:N.70, A:T.120
- Hydrogen bonds: A:S.275, A:G.276
EDO.4: 2 residues within 4Å:- Chain A: A.22, Q.23
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:A.22
- Water bridges: A:R.19
EDO.7: 7 residues within 4Å:- Chain A: L.12, Q.13, V.16
- Chain B: D.117, D.118, G.119, I.167
No protein-ligand interaction detected (PLIP)EDO.8: 4 residues within 4Å:- Chain A: F.71
- Chain B: H.233, S.275, G.276
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:S.275, B:G.276
- Water bridges: B:T.120, A:N.70
EDO.9: 2 residues within 4Å:- Chain B: A.22, Q.23
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.22
- Water bridges: B:R.19
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 3 residues within 4Å:- Chain A: H.24, E.27
- Chain B: R.90
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Water bridges: B:R.90
- Salt bridges: B:K.89, B:R.90, A:H.24
SO4.10: 3 residues within 4Å:- Chain A: R.90
- Chain B: H.24, E.27
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Salt bridges: B:H.24, A:K.89, A:R.90
- Water bridges: A:R.90
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lin, L.Y.C. et al., Structure and Mechanism of the Lipooligosaccharide Sialyltransferase from Neisseria Meningitidis. J.Biol.Chem. (2011)
- Release Date
- 2011-08-31
- Peptides
- CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x EGC: 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-TETRAMETHYL-BUTYL)-PHENOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOX Y}-ETHOXY)-ETHANOL(Non-covalent)
- 6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lin, L.Y.C. et al., Structure and Mechanism of the Lipooligosaccharide Sialyltransferase from Neisseria Meningitidis. J.Biol.Chem. (2011)
- Release Date
- 2011-08-31
- Peptides
- CMP-N-ACETYLNEURAMINATE-BETA-GALACTOSAMIDE-ALPHA-2,3-SIALYLTRANSFERASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A