SMTL ID : 2ykg.1

Structural insights into RNA recognition by RIG-I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.581, C.584, C.635, C.640 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.581, A:C.584, A:C.635, A:C.640

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: P.36, T.37, G.38, C.39, G.40, K.41, T.42 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:P.36, A:G.38, A:C.39, A:G.40, A:K.41, A:T.42 Water bridges: A:K.41 Salt bridges: A:K.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luo, D. et al., Structural Insights Into RNA Recognition by Rig-I. Cell(Cambridge,Mass.) (2011)

Release Date

2011-10-26

Peptides

PROBABLE ATP-DEPENDENT RNA HELICASE DDX58: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROBABLE ATP-DEPENDENT RNA HELICASE DDX58