SMTL ID : 2ynn.2 (1 other biounit)

yeast betaprime COP 1-304 with KTKTN motif

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: F.63, I.64, A.65, R.66 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:A.65, A:R.66 Water bridges: A:F.63 Salt bridges: A:R.66 SO4.2: 4 residues within 4Å: Chain A: Y.111, L.123, Q.134, G.171 No protein-ligand interaction detected (PLIP) SO4.3: 2 residues within 4Å: Chain A: N.176, F.177 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.176, A:N.176 Salt bridges: A:K.218

1 x CYS- THR- PHE- LYS- THR- LYS- THR- ASN: KTKTN MOTIF(Non-covalent)

CYS-THR-PHE-LYS-THR-LYS-THR-ASN.4: 9 residues within 4Å: Chain A: C.220, V.221, A.222, T.223, E.225, W.255, T.259, Y.260, K.261 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.222, A:T.223 Hydrogen bonds: A:C.220, A:V.221, A:T.223, A:E.225, A:E.225, A:E.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jackson, L.P. et al., Molecular Basis for Recognition of Dilysine Trafficking Motifs by Copi. Dev.Cell (2012)

Release Date

2012-12-12

Peptides

COATOMER SUBUNIT BETA': A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

COATOMER SUBUNIT BETA'

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