SMTL ID : 2yok.1

Cellobiohydrolase I Cel7A from Trichoderma harzianum at 1.7 A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: N.266, F.269 2 PLIP interactions: 2 interactions with chain A Water bridges: A:N.266, A:N.266 NAG.2: 3 residues within 4Å: Chain A: A.108, N.109, T.112 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.109, A:T.112 Water bridges: A:S.111, A:S.111, A:T.112 NAG.3: 2 residues within 4Å: Chain A: P.378, N.380 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.380 Water bridges: A:Y.377, A:T.379

1 x PE4: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL(Non-functional Binders)

PE4.4: 8 residues within 4Å: Chain A: C.4, Q.6, H.41, D.42, T.43, K.44, S.45, T.46 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.6, A:H.41 Water bridges: A:Q.6

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.5: 6 residues within 4Å: Chain A: T.242, R.247, D.255, V.368, W.372, Y.377 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.242, A:R.247, A:Y.377 Water bridges: A:R.247, A:R.247, A:D.255, A:D.255, A:R.390

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Textor, L.C. et al., Joint X-Ray Crystallographic and Molecular Dynamics Study of Cellobiohydrolase I from Trichoderma Harzianum: Deciphering the Structural Features of Cellobiohydrolase Catalytic Activity. FEBS J. (2013)

Release Date

2012-11-14

Peptides

EXOGLUCANASE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

EXOGLUCANASE 1