SMTL ID : 2yoo.1 (3 other biounits)

Cholest-4-en-3-one bound structure of CYP142 from Mycobacterium smegmatis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 31 residues within 4Å: Chain A: E.56, M.78, I.79, H.86, R.90, F.97, I.141, L.229, I.230, G.233, G.234, T.237, T.238, T.241, L.274, P.279, V.280, M.283, R.285, F.308, A.335, F.336, G.337, F.338, T.340, H.341, C.343, L.344, G.345, A.349 Ligands: K2B.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:F.97, A:I.141, A:L.229, A:L.274, A:V.280, A:V.280, A:F.308, A:F.336, A:F.336, A:L.344, A:L.344, A:A.349 Hydrogen bonds: A:F.338, A:F.338 Water bridges: A:R.285, A:H.341 Salt bridges: A:H.86, A:R.90, A:R.285, A:H.341 Metal complexes: A:C.343

1 x K2B: (8ALPHA,9BETA)-CHOLEST-4-EN-3-ONE(Non-covalent)

K2B.2: 15 residues within 4Å: Chain A: R.69, Q.72, M.75, Y.77, M.179, F.182, F.225, L.228, L.229, I.232, G.233, T.237, M.283, F.382 Ligands: HEM.1 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:R.69, A:Q.72, A:F.182, A:F.182, A:F.182, A:F.225, A:L.228, A:L.229, A:I.232, A:I.232, A:T.237, A:F.382, A:F.382

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Fernandez, E. et al., A Highly Conserved Mycobacterial Cholesterol Catabolic Pathway. Environ.Microbiol. (2013)

Release Date

2013-02-27

Peptides

P450 HEME-THIOLATE PROTEIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

P450 HEME-THIOLATE PROTEIN

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