- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x CO: COBALT (II) ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
APC.6: 23 residues within 4Å:- Chain A: K.25, L.31, Q.32, L.35, I.50, G.51, D.52, D.53, D.69, D.92, T.230, G.231, F.232
- Chain B: A.105, S.107, G.139, G.140, H.141, T.142
- Ligands: CO.1, CO.2, CO.3, CO.7
18 PLIP interactions:10 interactions with chain A, 8 interactions with chain B- Hydrogen bonds: A:K.25, A:K.25, A:G.51, A:T.230, A:G.231, B:S.107, B:G.140, B:T.142, B:T.142
- Water bridges: A:D.52, A:D.52, A:D.53, A:D.69, B:L.138, B:G.140, B:T.142
- Salt bridges: A:K.25, B:H.141
APC.13: 21 residues within 4Å:- Chain A: A.105, S.107, G.139, G.140, H.141, T.142
- Chain B: L.31, L.35, I.50, G.51, D.52, D.53, D.69, D.92, T.230, G.231, F.232
- Ligands: CO.5, CO.8, CO.9, CO.10
16 PLIP interactions:9 interactions with chain B, 7 interactions with chain A- Hydrogen bonds: B:G.51, B:G.51, B:T.230, B:G.231, A:S.107, A:G.140, A:T.142
- Water bridges: B:L.31, B:D.52, B:D.52, B:D.69, B:F.232, A:L.138, A:G.140, A:T.142
- Salt bridges: A:H.141
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Itoh, Y. et al., Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs. J.Mol.Biol. (2009)
- Release Date
- 2008-04-29
- Peptides
- Selenide, water dikinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-dimer
- Ligands
- 10 x CO: COBALT (II) ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 1 x PO4: PHOSPHATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Itoh, Y. et al., Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs. J.Mol.Biol. (2009)
- Release Date
- 2008-04-29
- Peptides
- Selenide, water dikinase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B