- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 8 x FE: FE (III) ION(Non-covalent)
FE.2: 5 residues within 4Å:- Chain A: E.80, H.108, H.154
- Ligands: FE.3, PO4.4
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.80, A:H.108, A:H.154, H2O.6
FE.3: 6 residues within 4Å:- Chain A: H.5, H.7, E.80, D.224
- Ligands: FE.2, PO4.4
5 PLIP interactions:4 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.5, A:H.7, A:E.80, A:D.224, H2O.6
FE.6: 5 residues within 4Å:- Chain B: E.80, H.108, H.154
- Ligands: FE.8, PO4.9
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:E.80, B:H.108, B:H.154, H2O.12
FE.8: 6 residues within 4Å:- Chain B: H.5, H.7, E.80, D.224
- Ligands: FE.6, PO4.9
5 PLIP interactions:4 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.5, B:H.7, B:E.80, B:D.224, H2O.12
FE.11: 5 residues within 4Å:- Chain C: E.80, H.108, H.154
- Ligands: FE.12, PO4.13
4 PLIP interactions:3 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:E.80, C:H.108, C:H.154, H2O.18
FE.12: 6 residues within 4Å:- Chain C: H.5, H.7, E.80, D.224
- Ligands: FE.11, PO4.13
5 PLIP interactions:4 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:H.5, C:H.7, C:E.80, C:D.224, H2O.18
FE.15: 5 residues within 4Å:- Chain D: E.80, H.108, H.154
- Ligands: FE.17, PO4.18
4 PLIP interactions:3 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:E.80, D:H.108, D:H.154, H2O.23
FE.17: 6 residues within 4Å:- Chain D: H.5, H.7, E.80, D.224
- Ligands: FE.15, PO4.18
5 PLIP interactions:4 interactions with chain D, 1 Ligand-Water interactions- Metal complexes: D:H.5, D:H.7, D:E.80, D:D.224, H2O.23
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
PO4.4: 11 residues within 4Å:- Chain A: H.7, H.13, H.38, E.80, H.108, D.116, D.224, H.226
- Ligands: ZN.1, FE.2, FE.3
5 PLIP interactions:5 interactions with chain A- Water bridges: A:N.191
- Salt bridges: A:H.7, A:H.38, A:H.108, A:H.226
PO4.9: 11 residues within 4Å:- Chain B: H.7, H.13, H.38, E.80, H.108, D.116, D.224, H.226
- Ligands: FE.6, ZN.7, FE.8
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:D.224
- Water bridges: B:D.116, B:N.191
- Salt bridges: B:H.7, B:H.38, B:H.108, B:H.226
PO4.13: 11 residues within 4Å:- Chain C: H.7, H.13, H.38, E.80, H.108, D.116, D.224, H.226
- Ligands: ZN.10, FE.11, FE.12
5 PLIP interactions:5 interactions with chain C- Water bridges: C:N.191
- Salt bridges: C:H.7, C:H.38, C:H.108, C:H.226
PO4.18: 11 residues within 4Å:- Chain D: H.7, H.13, H.38, E.80, H.108, D.116, D.224, H.226
- Ligands: FE.15, ZN.16, FE.17
8 PLIP interactions:8 interactions with chain D- Hydrogen bonds: D:E.80, D:D.224
- Water bridges: D:D.116, D:N.191
- Salt bridges: D:H.7, D:H.38, D:H.108, D:H.226
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 7 residues within 4Å:- Chain A: L.10, C.11, G.12, P.47, E.48, R.50, R.52
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:P.9
- Water bridges: A:G.12, A:P.47, A:R.50, A:R.52
GOL.14: 7 residues within 4Å:- Chain C: L.10, C.11, G.12, P.47, E.48, R.50, R.52
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:P.9
- Water bridges: C:G.12, C:P.47, C:R.50, C:R.52
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Omi, R. et al., Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8. Biochemistry (2007)
- Release Date
- 2007-11-27
- Peptides
- Histidinol phosphatase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 8 x FE: FE (III) ION(Non-covalent)
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Omi, R. et al., Crystal Structure of Monofunctional Histidinol Phosphate Phosphatase from Thermus thermophilus HB8. Biochemistry (2007)
- Release Date
- 2007-11-27
- Peptides
- Histidinol phosphatase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B