SMTL ID : 2z42.1

Crystal Structure of Family 7 Alginate Lyase A1-II' from Sphingomonas sp. A1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.16, Q.18, R.71, S.79, I.114 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.62, A:S.79 Water bridges: A:E.26, A:E.26, A:Y.199, A:Y.199 Salt bridges: A:K.16, A:R.71 SO4.2: 4 residues within 4Å: Chain A: S.63, S.64, P.123, Y.205 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.64, A:S.64, A:S.64 Water bridges: A:H.112 SO4.3: 2 residues within 4Å: Chain A: Q.133, Y.152 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ogura, K. et al., Substrate Recognition by Family 7 Alginagte Lyase from Sphingomonas sp. A1. To be published

Release Date

2008-05-27

Peptides

Alginate lyase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Alginate lyase

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