SMTL ID : 2z5x.1 (1 other biounit)

Crystal Structure of Human Monoamine Oxidase A with Harmine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 37 residues within 4Å: Chain A: I.8, G.9, G.10, G.11, I.12, S.13, L.31, E.32, A.33, R.34, G.38, G.39, R.40, T.41, V.54, G.55, G.56, A.57, Y.58, H.231, P.232, V.233, A.261, I.262, L.266, V.292, W.386, Y.391, C.395, Y.396, G.423, T.424, G.432, Y.433, M.434, A.437 Ligands: HRM.2 33 PLIP interactions: 33 interactions with chain A Hydrophobic interactions: A:R.40, A:V.292, A:W.386, A:Y.396 Hydrogen bonds: A:G.10, A:G.10, A:S.13, A:A.33, A:R.34, A:R.34, A:G.38, A:R.40, A:G.56, A:A.57, A:Y.58, A:Y.58, A:V.233, A:V.233, A:T.424, A:G.432, A:M.434 Water bridges: A:G.11, A:I.12, A:I.12, A:G.14, A:G.39, A:R.40, A:R.40, A:Q.63, A:E.435 Salt bridges: A:R.40, A:R.40 pi-Stacking: A:Y.391

1 x HRM: 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE(Non-covalent)

HRM.2: 12 residues within 4Å: Chain A: Y.58, I.169, N.170, F.197, Q.204, C.312, I.324, L.326, F.341, Y.396, Y.433 Ligands: FAD.1 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.58, A:I.169, A:Q.204, A:I.324, A:I.324, A:L.326, A:L.326, A:F.341, A:Y.396 Water bridges: A:Q.204

2 x DCX: DECYL(DIMETHYL)PHOSPHINE OXIDE(Non-covalent)

DCX.3: 5 residues within 4Å: Chain A: V.104, W.105, P.107, Y.110, L.111 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:W.105, A:P.107, A:Y.110, A:L.111 DCX.4: 3 residues within 4Å: Chain A: Y.110, T.478, W.480 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:W.480 Hydrogen bonds: A:E.481

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 6 residues within 4Å: Chain A: R.34, D.35, R.36, Y.42, K.384, E.389 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.34, A:D.35, A:R.36, A:K.384, A:K.384 Water bridges: A:D.35 GOL.6: 9 residues within 4Å: Chain A: Y.51, V.52, D.53, Y.78, K.207, F.208, G.211, D.328, K.330 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.53, A:D.53, A:K.207, A:D.328, A:D.328 Water bridges: A:D.53, A:F.208, A:D.328, A:K.330 GOL.7: 7 residues within 4Å: Chain A: N.64, L.67, R.68, K.71, P.465, S.467, D.469 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.64, A:R.68, A:D.469, A:D.469, A:D.469 Water bridges: A:N.64, A:K.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Son, S.Y. et al., Structure of human monoamine oxidase A at 2.2-A resolution: The control of opening the entry for substrates/inhibitors. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-04-01

Peptides

Amine oxidase [flavin-containing] A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Amine oxidase [flavin-containing] A

Related Entries With Identical Sequence