SMTL ID : 2z65.1 (3 other biounits)

Crystal structure of the human TLR4 TV3 hybrid-MD-2-Eritoran complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain A: L.177, N.179, R.201 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain A: H.122, K.124, N.147 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.124, A:K.124, A:N.147 NAG.3: 1 residues within 4Å: Chain A: N.9 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H.M. et al., Crystal Structure of the TLR4-MD-2 Complex with Bound Endotoxin Antagonist Eritoran. Cell(Cambridge,Mass.) (2007)

Release Date

2007-09-18

Peptides

Toll-like receptor 4, Variable lymphocyte receptor B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Toll-like receptor 4, Variable lymphocyte receptor B

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