SMTL ID : 2z6a.1

S-Adenosyl-L-methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates during DNA Cytosine Methylation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.88 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 21 residues within 4Å: Chain C: F.18, A.19, G.20, L.21, G.22, G.23, F.24, N.39, E.40, W.41, D.42, D.60, I.61, T.62, G.78, P.80, L.100, Y.285, N.304, S.305, V.306 20 PLIP interactions: 20 interactions with chain C Hydrogen bonds: C:F.18, C:L.21, C:G.22, C:G.23, C:W.41, C:D.60, C:I.61, C:Y.285, C:V.306 Water bridges: C:D.42, C:D.42, C:D.42, C:G.78, C:K.300, C:N.304, C:N.304 pi-Stacking: C:F.18, C:F.18, C:W.41, C:W.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Youngblood, B. et al., S-Adenosyl-l-methionine-Dependent Methyl Transfer: Observable Precatalytic Intermediates during DNA Cytosine Methylation. Biochemistry (2007)

Release Date

2007-08-21

Peptides

Modification methylase HhaI: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

Modification methylase HhaI