SMTL ID : 2z6d.1

Crystal structure of LOV1 domain of phototropin2 from Arabidopsis thaliana

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.1: 20 residues within 4Å: Chain A: V.20, S.22, N.53, C.54, R.55, L.57, Q.58, V.67, I.70, R.71, V.74, L.84, N.86, N.96, L.98, V.100, F.113, I.114, G.115, Q.117 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.74, A:V.100, A:V.100 Hydrogen bonds: A:N.53, A:C.54, A:R.55, A:Q.58, A:N.86, A:N.86, A:N.96, A:Q.117 Water bridges: A:N.53, A:R.55, A:R.55, A:R.71, A:R.71 Salt bridges: A:R.55, A:R.71 FMN.2: 20 residues within 4Å: Chain B: V.20, S.22, N.53, C.54, R.55, L.57, Q.58, V.67, I.70, R.71, V.74, L.84, N.86, N.96, L.98, V.100, F.113, I.114, G.115, Q.117 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:V.100 Hydrogen bonds: B:N.53, B:C.54, B:R.55, B:Q.58, B:N.86, B:N.86, B:N.96, B:Q.117 Water bridges: B:N.53, B:R.55 Salt bridges: B:R.55, B:R.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakasako, M. et al., Structural basis of the LOV1 dimerization of Arabidopsis phototropins 1 and 2. J.Mol.Biol. (2008)

Release Date

2008-07-29

Peptides

Phototropin-2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phototropin-2