SMTL ID : 2z7g.1

Crystal structure of adenosine deaminase ligated with EHNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.14, H.16, H.213, H.237, D.294 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.14, A:H.16, A:H.213, A:D.294, H2O.77

1 x EH9: (2S,3R)-3-(6-AMINO-9H-PURIN-9-YL)NONAN-2-OL(Non-covalent)

EH9.2: 11 residues within 4Å: Chain A: H.16, D.18, F.60, F.64, Y.101, L.105, W.116, M.154, A.182, G.183, D.295 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.64, A:L.105, A:W.116, A:A.182 Hydrogen bonds: A:D.18, A:D.295 Water bridges: A:G.183 pi-Stacking: A:H.16, A:H.16, A:F.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kinoshita, T. et al., Conformational change of adenosine deaminase during ligand-exchange in a crystal. Biochem.Biophys.Res.Commun. (2008)

Release Date

2008-07-01

Peptides

Adenosine deaminase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Adenosine deaminase

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