SMTL ID : 2z93.2 (1 other biounit)

Crystal structure of Fab fragment of anti-ciguatoxin antibody 10C9 in complex with CTX3C-ABCD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-1-1-mer

Ligands

1 x END: 1,6:5,9:8,12:11,16-TETRAANHYDRO-2,3,4,10,13,14-HEXADEOXY-D-GLYCERO-D-ALLO-D-GULO-HEPTADECA-2,13-DIENITOL(Non-covalent)

END.1: 13 residues within 4Å: Chain A: H.34, W.46, N.57, D.97, W.104 Chain B: Y.35, R.45, Q.88, W.90, S.92, N.93, P.95, F.97 11 PLIP interactions: 7 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:Y.35, B:P.95, B:F.97, A:W.46, A:W.104 Hydrogen bonds: B:Y.35, B:R.45, B:Q.88, B:S.92 Water bridges: A:H.34, A:D.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ui, M. et al., How Protein Recognizes Ladder-like Polycyclic Ethers: INTERACTIONS BETWEEN CIGUATOXIN (CTX3C) FRAGMENTS AND ITS SPECIFIC ANTIBODY 10C9. J.Biol.Chem. (2008)

Release Date

2008-05-06

Peptides

Anti-ciguatoxin antibody 10C9 Fab heavy chain: A
Anti-ciguatoxin antibody 10C9 Fab light chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Anti-ciguatoxin antibody 10C9 Fab heavy chain

Anti-ciguatoxin antibody 10C9 Fab light chain

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