SMTL ID : 2z9z.1

Crystal structure of CERT START domain(N504A mutant), in complex with C10-diacylglycerol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x DDR: (2S)-3-hydroxypropane-1,2-diyl didecanoate(Non-covalent)

DDR.1: 20 residues within 4Å: Chain A: F.93, R.99, W.102, E.103, I.106, Q.124, H.126, W.130, R.135, Y.139, S.141, A.178, I.180, V.182, Y.210, V.214, V.228, E.232, Y.233, F.236 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:W.130, A:R.135, A:A.178, A:I.180, A:I.180, A:V.182, A:V.214, A:V.228, A:E.232, A:Y.233, A:Y.233, A:F.236, A:F.236 Hydrogen bonds: A:F.93, A:Q.124, A:S.141, A:Y.210 Salt bridges: A:R.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kudo, N. et al., Structural basis for specific lipid recognition by CERT responsible for nonvesicular trafficking of ceramide. Proc.Natl.Acad.Sci.Usa (2008)

Release Date

2008-02-12

Peptides

Lipid-transfer protein CERT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lipid-transfer protein CERT