SMTL ID : 2zau.1

Crystal structure of an N-terminally truncated selenophosphate synthetase from Aquifex aeolicus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-hexamer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: K.154, K.157, P.238, K.239 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:K.239 Water bridges: A:G.240 Salt bridges: A:K.154, A:K.157, A:K.239 PO4.2: 3 residues within 4Å: Chain B: K.154, K.157, K.239 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:K.239 Water bridges: B:G.240 Salt bridges: B:K.154, B:K.157, B:K.239 PO4.3: 5 residues within 4Å: Chain C: K.154, K.157, Y.237, P.238, K.239 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:K.239 Water bridges: C:K.157, C:K.157, C:G.240 Salt bridges: C:K.154, C:K.157, C:K.239 PO4.4: 4 residues within 4Å: Chain D: K.154, K.157, P.238, K.239 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:K.239 Water bridges: D:G.240 Salt bridges: D:K.154, D:K.157, D:K.239 PO4.5: 3 residues within 4Å: Chain E: K.154, K.157, K.239 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:K.239 Water bridges: E:G.240 Salt bridges: E:K.154, E:K.157, E:K.239 PO4.6: 5 residues within 4Å: Chain F: K.154, K.157, Y.237, P.238, K.239 7 PLIP interactions: 7 interactions with chain F Hydrogen bonds: F:K.239 Water bridges: F:K.157, F:K.157, F:G.240 Salt bridges: F:K.154, F:K.157, F:K.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsumoto, E. et al., Structure of an N-terminally truncated selenophosphate synthetase from Aquifex aeolicus. Acta Crystallogr.,Sect.F (2008)

Release Date

2008-06-17

Peptides

Selenide, water dikinase: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Selenide, water dikinase