SMTL ID : 2zb3.2 (1 other biounit)

Crystal structure of mouse 15-ketoprostaglandin delta-13-reductase in complex with NADPH

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1: 27 residues within 4Å: Chain A: P.52, M.137, T.141, G.167, A.168, C.169, C.189, G.190, K.194, Y.210, N.233, V.234, I.238, C.255, G.256, Q.257, I.258, S.259, Y.261, F.289, T.290, V.291, M.334, M.335, G.337, N.339, G.341 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:T.141 Hydrogen bonds: A:A.168, A:C.169, A:G.190, A:K.194, A:N.233, A:C.255, A:Q.257, A:I.258, A:V.291, A:N.339, A:N.339 Water bridges: A:D.51, A:D.51, A:D.51, A:Y.53, A:G.167, A:G.170, A:Y.210, A:Y.210, A:Y.210, A:Y.210, A:N.339, A:K.342 Salt bridges: A:K.194 NDP.2: 27 residues within 4Å: Chain B: P.52, M.137, T.141, G.167, A.168, C.169, C.189, G.190, K.194, Y.210, N.233, V.234, I.238, C.255, G.256, Q.257, I.258, S.259, Y.261, F.289, T.290, V.291, M.334, M.335, G.337, N.339, G.341 21 PLIP interactions: 21 interactions with chain B Hydrophobic interactions: B:T.141 Hydrogen bonds: B:A.168, B:C.169, B:G.190, B:K.194, B:Y.210, B:N.233, B:C.255, B:Q.257, B:I.258, B:Y.261, B:V.291, B:N.339, B:N.339 Water bridges: B:D.51, B:Y.53, B:G.167, B:G.170, B:N.339, B:K.342 Salt bridges: B:K.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y.H. et al., Structural basis for catalytic and inhibitory mechanisms of human prostaglandin reductase PTGR2. Structure (2008)

Release Date

2008-09-30

Peptides

Prostaglandin reductase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Prostaglandin reductase 2

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