SMTL ID : 2zbw.1

Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 36 residues within 4Å: Chain A: V.11, G.12, G.14, P.15, T.16, G.17, V.34, D.35, P.36, L.37, G.42, Q.43, L.44, L.47, Y.48, I.53, D.55, R.87, A.88, A.116, A.117, G.118, V.119, G.120, A.121, F.122, W.260, G.286, D.287, P.296, L.297, I.298 Chain B: H.326, S.327, S.328, E.329 26 PLIP interactions: 21 interactions with chain A, 5 interactions with chain B Hydrophobic interactions: A:I.53, A:I.298, B:H.326 Hydrogen bonds: A:T.16, A:T.16, A:T.16, A:G.17, A:Q.43, A:Q.43, A:Q.43, A:Y.48, A:A.88, A:A.88, A:V.119, A:F.122, A:D.287, A:P.296, B:S.328, B:E.329 Water bridges: A:A.13, A:G.14, A:G.42, A:G.118, A:A.121 pi-Stacking: B:H.326, B:H.326 FAD.2: 34 residues within 4Å: Chain A: H.326, S.327, S.328, E.329 Chain B: V.11, G.12, G.14, P.15, T.16, G.17, V.34, D.35, P.36, G.42, Q.43, L.44, L.47, Y.48, I.53, D.55, R.87, A.88, A.116, A.117, G.118, G.120, A.121, F.122, W.260, G.286, D.287, P.296, L.297, I.298 34 PLIP interactions: 26 interactions with chain B, 8 interactions with chain A Hydrophobic interactions: B:L.47, B:Y.48, A:H.326 Hydrogen bonds: B:G.14, B:T.16, B:T.16, B:G.17, B:Q.43, B:Q.43, B:Y.48, B:Y.48, B:D.55, B:A.88, B:A.88, B:F.122, B:D.287, B:P.296, B:I.298, A:S.327, A:S.328 Water bridges: B:A.13, B:G.42, B:G.118, B:V.119, B:A.121, B:L.257, B:I.288, B:V.299, A:Y.23, A:Y.23, A:H.326 pi-Stacking: B:Y.48, A:H.326, A:H.326

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ebihara, A. et al., Crystal structure of thioredoxin reductase-like protein from Thermus thermophilus HB8. To be Published

Release Date

2007-11-13

Peptides

Thioredoxin reductase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thioredoxin reductase