SMTL ID : 2zcw.1

Crystal Structure of TTHA1359, a Transcriptional Regulator, CRP/FNR family from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

6 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 9 residues within 4Å: Chain A: R.109, E.112, R.113, T.116, Q.117, A.195, E.196, S.197, R.198 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.112, A:T.116 Water bridges: A:T.116 MPD.2: 9 residues within 4Å: Chain A: E.139, E.140, V.144, R.177, S.178, G.179, Y.180, K.182, Q.184 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.177, A:Y.180 Hydrogen bonds: A:G.179 MPD.3: 2 residues within 4Å: Chain A: T.164, R.172 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:T.164 Hydrogen bonds: A:R.172, A:R.172 Water bridges: A:E.169 MPD.4: 9 residues within 4Å: Chain B: R.109, E.112, R.113, T.116, Q.117, A.195, E.196, S.197, R.198 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:T.116, B:T.116 MPD.5: 9 residues within 4Å: Chain B: E.139, E.140, V.144, R.177, S.178, G.179, Y.180, K.182, Q.184 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:R.177, B:Y.180 Hydrogen bonds: B:G.179 MPD.6: 2 residues within 4Å: Chain B: T.164, R.172 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:T.164 Hydrogen bonds: B:R.172, B:R.172 Water bridges: B:E.169

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agari, Y. et al., Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator. Mol.Microbiol. (2008)

Release Date

2007-12-04

Peptides

Transcriptional regulator, FNR/CRP family: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Transcriptional regulator, FNR/CRP family