SMTL ID : 2zdx.1

Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

homo-dimer

Ligands

2 x P4A: 4-[4-(4-methoxyphenyl)-5-methyl-1H-pyrazol-3-yl]benzene-1,3-diol(Non-covalent)

P4A.1: 12 residues within 4Å: Chain A: L.238, N.241, A.242, A.245, D.276, G.278, G.280, V.281, L.289, F.313, L.333, T.341 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.245, A:V.281, A:L.289, A:L.333, A:T.341 Hydrogen bonds: A:N.241, A:G.278, A:G.280, A:F.313 Water bridges: A:T.341, A:T.341 P4A.2: 12 residues within 4Å: Chain B: L.238, N.241, A.242, R.244, A.245, D.276, G.278, G.280, V.281, L.289, L.333, T.341 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:A.245, B:V.281, B:L.289, B:L.289, B:L.333, B:T.341 Hydrogen bonds: B:N.241, B:G.278, B:G.280, B:T.341 Water bridges: B:A.242, B:D.276, B:G.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kukimoto-Niino, M. et al., Inhibitor-bound structures of human pyruvate dehydrogenase kinase 4. Acta Crystallogr.,Sect.D (2011)

Release Date

2008-12-09

Peptides

Pyruvate dehydrogenase kinase isozyme 4: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Pyruvate dehydrogenase kinase isozyme 4

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