SMTL ID : 2zhr.2 (1 other biounit)

Crystal structure of BACE1 in complex with OM99-2 at pH 5.0

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GLU- VAL- ASN- 1OL- ALA- GLU- PHE: inhibitor OM99-2(Non-covalent)

GLU-VAL-ASN-1OL-ALA-GLU-PHE.1: 24 residues within 4Å: Chain A: S.28, G.29, Q.30, L.48, D.50, G.52, S.53, P.88, Y.89, T.90, Q.91, F.126, I.128, E.143, I.144, R.146, W.215, Y.216, D.246, G.248, T.249, T.250, N.251, R.253 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:L.48, A:Y.89, A:Y.89, A:Q.91, A:F.126, A:I.128, A:I.144, A:W.215 Hydrogen bonds: A:D.50, A:G.52, A:P.88, A:T.90, A:Q.91, A:R.146, A:Y.216, A:G.248, A:T.250, A:T.250, A:T.250, A:R.253 Water bridges: A:Y.216, A:K.242, A:N.251, A:N.251, A:R.325, A:S.343

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shimizu, H. et al., Crystal structure of an active form of BACE1, an enzyme responsible for amyloid beta protein production. Mol.Cell.Biol. (2008)

Release Date

2008-04-22

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

Related Entries With Identical Sequence