SMTL ID : 2zif.1

Crystal Structure of TTHA0409, Putative DNA Modification Methylase from Thermus thermophilus HB8- Complexed with S-Adenosyl-L-Methionine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 17 residues within 4Å: Chain A: G.27, D.28, A.29, S.47, P.48, P.49, P.219, F.220, F.243, A.244, G.245, T.246, G.247, T.248, E.264, L.265, V.266 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:D.28, A:A.29, A:F.220, A:T.246, A:G.247, A:T.248, A:L.265 Water bridges: A:S.47 pi-Stacking: A:F.243 SAM.2: 20 residues within 4Å: Chain B: G.27, D.28, A.29, S.47, P.48, P.49, A.218, P.219, F.220, P.242, F.243, A.244, G.245, T.246, G.247, T.248, E.264, L.265, V.266, Y.269 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:P.219 Hydrogen bonds: B:D.28, B:A.29, B:T.246, B:G.247, B:T.248, B:T.248, B:L.265 Water bridges: B:S.47 pi-Stacking: B:F.243, B:F.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Morita, R. et al., Crystal structure of a putative DNA methylase TTHA0409 from Thermus thermophilus HB8. Proteins (2008)

Release Date

2008-07-29

Peptides

Putative modification methylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative modification methylase

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