SMTL ID : 2zjh.1

Crystal structure of the human BACE1 catalytic domain in complex with N-(1-benzyl-piperidin-4-yl)-4-mercapto-butyramide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x F1H: N-(1-benzylpiperidin-4-yl)-4-sulfanylbutanamide(Non-covalent)

F1H.1: 13 residues within 4Å: Chain A: L.50, D.52, G.54, S.55, Y.91, I.138, Y.218, I.246, D.248, G.250, T.251, T.349, C.352 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.50, A:Y.218, A:I.246 Hydrogen bonds: A:D.248 Salt bridges: A:D.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W. et al., Fragment-based discovery of novel BACE1 inhibitors using Tethering technology. To be Published

Release Date

2009-01-20

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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