SMTL ID : 2zjj.1

Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid (2-mercapto-ethyl)-amide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x F1J: (2S)-4-(4-fluorobenzyl)-N-(2-sulfanylethyl)piperazine-2-carboxamide(Non-covalent)

F1J.1: 14 residues within 4Å: Chain A: G.31, Q.32, G.33, L.50, Y.91, T.92, Q.93, F.128, I.130, I.138, D.248, G.250, C.251, T.252 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.50, A:L.50, A:I.130 Hydrogen bonds: A:T.92, A:Q.93, A:Q.93, A:G.250

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W. et al., Fragment-based discovery of novel BACE1 inhibitors using Tethering technology. To be Published

Release Date

2009-01-20

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1