SMTL ID : 2zjk.1 (2 other biounits)

Crystal structure of the human BACE1 catalytic domain in complex with 4-(4-fluoro-benzyl)-piperazine-2-carboxylic acid(3-mercapto-propyl)-amide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x F1K: (2S)-4-(4-fluorobenzyl)-N-(3-sulfanylpropyl)piperazine-2-carboxamide(Non-covalent)

F1K.1: 11 residues within 4Å: Chain A: G.31, L.50, Y.91, C.92, F.128, I.130, W.135, I.138, G.250, T.251, T.252 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.50, A:L.50, A:Y.91, A:I.130, A:W.135 Hydrogen bonds: A:Y.91, A:T.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, W. et al., Fragment-based discovery of novel BACE1 inhibitors using Tethering technology. To be Published

Release Date

2009-01-20

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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