SMTL ID : 2zkd.1 (1 other biounit)

Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain C: P.16, A.17, N.18, R.54 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:P.16 Water bridges: C:A.17 Salt bridges: C:R.54

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain C: G.25, P.27, L.204 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arita, K. et al., Recognition of hemi-methylated DNA by the SRA protein UHRF1 by a base-flipping mechanism. Nature (2008)

Release Date

2008-09-09

Peptides

E3 ubiquitin-protein ligase UHRF1: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
A

E3 ubiquitin-protein ligase UHRF1

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