SMTL ID : 2zm0.2 (1 other biounit)

Structure of 6-aminohexanoate-dimer hydrolase, G181D/H266N/D370Y mutant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: R.107, R.251, D.252 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.252, A:D.252 Water bridges: A:D.252 Salt bridges: A:R.107, A:R.251 SO4.2: 1 residues within 4Å: Chain A: R.293 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.293 Salt bridges: A:R.293

2 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.3: 11 residues within 4Å: Chain A: S.112, Y.215, D.314, G.316, F.317, W.331, I.343, G.344, I.345, Y.370, H.375 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:S.112, A:G.344, A:I.345 Water bridges: A:S.112, A:I.343, A:Q.348 Salt bridges: A:D.314 MES.4: 2 residues within 4Å: Chain A: R.99, G.101 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.99, A:R.99 Salt bridges: A:R.99

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 10 residues within 4Å: Chain A: M.111, S.112, K.115, D.181, W.186, S.217, F.264, N.266, G.267, I.345 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.112, A:D.181 Water bridges: A:S.112, A:S.112

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawashima, Y. et al., Molecular design of a nylon-6 byproduct-degrading enzyme from a carboxylesterase with a beta-lactamase fold. Febs J. (2009)

Release Date

2009-04-07

Peptides

6-aminohexanoate-dimer hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

6-aminohexanoate-dimer hydrolase

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