SMTL ID : 2zop.3 (2 other biounits)

X-ray crystal structure of a CRISPR-associated Cmr5 family protein from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-hexamer

Ligands

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.54, G.55, K.56, H.59 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.55, A:K.56 Salt bridges: A:R.54, A:K.56, A:H.59 SO4.2: 2 residues within 4Å: Chain A: M.1, R.2 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.2 Salt bridges: A:R.2 SO4.3: 2 residues within 4Å: Chain B: M.1, R.2 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.2 SO4.4: 4 residues within 4Å: Chain B: R.54, G.55, K.56, H.59 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.55, B:K.56 Salt bridges: B:R.54, B:K.56, B:H.59 SO4.5: 3 residues within 4Å: Chain B: T.3, R.4, S.5 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.4, B:S.5 SO4.6: 2 residues within 4Å: Chain C: R.4, S.5 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.4, C:S.5, C:S.5 Water bridges: C:R.4 SO4.7: 3 residues within 4Å: Chain B: Y.13 Chain F: R.17, K.21 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain F Hydrogen bonds: B:Y.13, B:Y.13 Salt bridges: F:R.17, F:K.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sakamoto, K. et al., X-ray crystal structure of a CRISPR-associated RAMP superfamily protein, Cmr5, from Thermus thermophilus HB8. Proteins (2009)

Release Date

2009-02-10

Peptides

Putative uncharacterized protein TTHB164: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Putative uncharacterized protein TTHB164

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