SMTL ID : 2zou.1 (1 other biounit)

Crystal structure of human F-spondin reeler domain (fragment 2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: N.64, R.65, E.66, D.68, K.69, D.72 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.66, A:K.69, A:K.69, A:D.72 EDO.2: 6 residues within 4Å: Chain A: F.56, T.57, S.125, I.126, V.127, I.131 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.56, A:S.125 Water bridges: A:F.56 EDO.3: 5 residues within 4Å: Chain A: E.23, S.25, S.46, A.47, A.48 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.23, A:A.48 Water bridges: A:A.47 EDO.4: 8 residues within 4Å: Chain A: G.20, T.22, A.124, I.132, Y.133, F.134, Q.135, L.140 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.18, A:A.124, A:Q.135 Water bridges: A:A.124, A:L.140, A:L.140

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nagae, M. et al., Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop. Acta Crystallogr.,Sect.D (2008)

Release Date

2008-10-14

Peptides

Spondin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Spondin-1

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