SMTL ID : 2zp1.1

Structual basis of iodo-tyrosine recognition by engineered archeal tyrosyl-tRNA synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-dimer

Ligands

2 x IYR: 3-IODO-TYROSINE(Non-covalent)

IYR.1: 13 residues within 4Å: Chain A: Y.32, G.34, F.35, E.36, L.65, A.67, A.70, Q.109, I.137, Y.151, Q.155, T.158, Q.173 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.32, A:A.67, A:A.70, A:Q.155 Hydrogen bonds: A:G.34, A:E.36, A:Y.151, A:Y.151, A:Q.155, A:T.158, A:Q.173 IYR.2: 13 residues within 4Å: Chain B: Y.32, G.34, F.35, E.36, L.65, A.67, A.70, Q.109, I.137, Y.151, Q.155, T.158, Q.173 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:Y.32, B:A.67, B:A.70, B:Q.155 Hydrogen bonds: B:Y.32, B:G.34, B:E.36, B:Y.151, B:Q.155, B:T.158, B:T.158, B:Q.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oki, K. et al., Structual Basis of Iodo-Tyrosine Recognition by Engineered Archeal Tyrosyl-tRNA Synthetase. To be Published

Release Date

2009-02-17

Peptides

Tyrosyl-tRNA synthetase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Tyrosyl-tRNA synthetase