SMTL ID : 2zr1.2 (1 other biounit)

Agglutinin from Abrus Precatorius

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: N.215 Chain B: T.15, V.16, L.48, L.53, N.140 5 PLIP interactions: 1 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:N.215, B:T.15, B:T.15, B:N.140 Hydrophobic interactions: B:V.16

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, J. et al., A biophysical elucidation for less toxicity of Agglutinin than Abrin-a from the Seeds of Abrus Precatorius in consequence of crystal structure. J.Biomed.Sci. (2010)

Release Date

2009-08-25

Peptides

Agglutinin-1 chain A: A
Agglutinin-1 chain B: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Agglutinin-1 chain A

Agglutinin-1 chain B

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