SMTL ID : 2zrt.1 (3 other biounits)

Crystal structure of Zn2+-bound form of des3-23ALG-2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

homo-dimer

Ligands

9 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: D.80, D.82, M.86, I.87, D.88, E.91 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.80, A:D.82, A:M.86 ZN.2: 5 residues within 4Å: Chain A: D.146, D.148, D.150, W.152 Ligands: ZN.3 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.146, A:D.150, A:W.152 ZN.3: 3 residues within 4Å: Chain A: D.148, D.150 Ligands: ZN.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.148, A:D.150 ZN.4: 6 residues within 4Å: Chain B: D.13, D.15, S.17, V.19, S.21, E.24 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.13, B:D.15, B:S.17, B:V.19, B:E.24 ZN.5: 8 residues within 4Å: Chain B: D.80, D.82, S.84, M.86, I.87, D.88, E.91 Ligands: ZN.7 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.80, B:D.82, B:S.84, B:M.86, B:E.91 ZN.6: 5 residues within 4Å: Chain B: D.146, D.148, D.150, W.152 Ligands: ZN.8 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.146, B:D.148, B:D.150, B:W.152 ZN.7: 6 residues within 4Å: Chain B: D.82, S.84, D.88, E.91, Q.122 Ligands: ZN.5 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.82, B:D.82 ZN.8: 3 residues within 4Å: Chain B: D.148, D.150 Ligands: ZN.6 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.148, B:D.150 ZN.9: 2 residues within 4Å: Chain B: D.80, N.83 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Suzuki, H. et al., Crystallization and X-ray diffraction analysis of N-terminally truncated human ALG-2. ACTA CRYSTALLOGR.,SECT.F (2008)

Release Date

2008-11-04

Peptides

Programmed cell death protein 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Programmed cell death protein 6

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