SMTL ID : 2zu8.1

Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x GDD: GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE(Non-covalent)

GDD.1: 23 residues within 4Å: Chain A: P.58, M.59, K.60, E.62, V.83, N.85, Q.117, G.144, K.145, G.148, D.168, A.169, D.170, W.202, N.248, G.250, Y.268, E.271, H.310, H.312, K.315, H.319, M.323 21 PLIP interactions: 21 interactions with chain A Hydrogen bonds: A:K.60, A:K.60, A:E.62, A:N.85, A:Q.117, A:Q.117, A:Q.117, A:G.144, A:K.145, A:D.168, A:A.169, A:D.170, A:D.170, A:N.248, A:G.250 Salt bridges: A:H.312, A:H.312, A:K.315, A:K.315, A:H.319, A:H.319 GDD.2: 22 residues within 4Å: Chain B: P.58, M.59, K.60, E.62, V.83, N.85, Q.117, G.144, K.145, D.168, A.169, D.170, W.202, N.248, G.250, Y.268, E.271, H.310, H.312, K.315, H.319, M.323 22 PLIP interactions: 22 interactions with chain B Hydrogen bonds: B:K.60, B:K.60, B:E.62, B:E.62, B:E.62, B:N.85, B:Q.117, B:Q.117, B:G.144, B:K.145, B:D.168, B:A.169, B:D.170, B:D.170, B:D.170, B:N.248, B:Y.268 Salt bridges: B:H.312, B:H.312, B:K.315, B:H.319, B:H.319

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawamura, T. et al., Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii. To be Published

Release Date

2009-10-27

Peptides

Mannosyl-3-phosphoglycerate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mannosyl-3-phosphoglycerate synthase

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