- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- monomer
- Ligands
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 8 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)
ZN.2: 3 residues within 4Å:- Chain A: E.201, Y.299, E.342
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.201, A:E.342, H2O.3, H2O.13
ZN.3: 3 residues within 4Å:- Chain A: H.76, E.108
- Ligands: ZN.5
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:H.76, A:E.108, H2O.4, H2O.14, H2O.14
ZN.4: 2 residues within 4Å:- Chain A: D.321, H.325
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.321, A:D.321, A:H.325, H2O.14, H2O.14
ZN.5: 3 residues within 4Å:- Chain A: H.76, E.108
- Ligands: ZN.3
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.108, A:E.108, H2O.4, H2O.14
ZN.6: 2 residues within 4Å:- Chain A: H.62, D.410
1 PLIP interactions:1 interactions with chain A- Metal complexes: A:H.62
ZN.7: 3 residues within 4Å:- Chain A: H.62, C.372, D.373
3 PLIP interactions:3 interactions with chain A- Metal complexes: A:H.62, A:C.372, A:D.373
ZN.8: 2 residues within 4Å:- Chain A: H.349, D.400
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:H.349, A:D.400, H2O.10, H2O.14
ZN.9: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.10: 3 residues within 4Å:- Chain A: K.189, Y.190
- Ligands: GOL.11
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.189
- Water bridges: A:Y.190
GOL.11: 5 residues within 4Å:- Chain A: K.141, K.189, Y.190, W.191
- Ligands: GOL.10
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.141, A:K.141, A:W.191
GOL.12: 2 residues within 4Å:- Chain A: Y.33
- Ligands: GOL.17
No protein-ligand interaction detected (PLIP)GOL.14: 3 residues within 4Å:- Chain A: W.272, W.273, V.303
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:W.273
GOL.15: 4 residues within 4Å:- Chain A: N.85, E.87, D.88, L.91
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.85, A:D.88
GOL.16: 7 residues within 4Å:- Chain A: H.79, G.80, L.81, W.82, K.83, W.394
- Ligands: GOL.18
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:G.80, A:G.80, A:L.81, A:W.82, A:K.83
- Water bridges: A:G.118
GOL.17: 3 residues within 4Å:- Chain A: Y.33, Q.34
- Ligands: GOL.12
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:Y.33, A:Q.34
- Water bridges: A:Q.34, A:Q.34
GOL.18: 4 residues within 4Å:- Chain A: N.75, H.79, D.382
- Ligands: GOL.16
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:G.80, A:D.382
- Water bridges: A:H.79
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, H.-W. et al., Structure of hyperthermophilic endocellulase from Pyrococcus horikoshii. Proteins (2009)
- Release Date
- 2009-11-03
- Peptides
- 458aa long hypothetical endo-1,4-beta-glucanase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- monomer
- Ligands
- 2 x ACT: ACETATE ION(Non-functional Binders)
- 8 x ZN: ZINC ION(Non-covalent)(Non-functional Binders)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, H.-W. et al., Structure of hyperthermophilic endocellulase from Pyrococcus horikoshii. Proteins (2009)
- Release Date
- 2009-11-03
- Peptides
- 458aa long hypothetical endo-1,4-beta-glucanase: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A