SMTL ID : 2zvq.1

Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAP and alpha-naphthol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x A3P: ADENOSINE-3'-5'-DIPHOSPHATE(Non-covalent)

A3P.1: 18 residues within 4Å: Chain A: K.48, S.49, G.50, T.51, T.52, W.53, R.130, S.138, Y.193, S.227, S.228, F.229, M.232, F.255, M.256, R.257, K.258, G.259 30 PLIP interactions: 30 interactions with chain A Hydrogen bonds: A:K.48, A:S.49, A:G.50, A:T.51, A:T.51, A:T.52, A:T.52, A:S.138, A:Y.193, A:S.227, A:F.255, A:R.257, A:K.258, A:G.259 Water bridges: A:T.51, A:T.51, A:T.52, A:W.53, A:W.53, A:R.130, A:S.138, A:F.229, A:F.229, A:I.260 Salt bridges: A:K.48, A:R.130, A:R.257 pi-Stacking: A:W.53, A:F.229, A:F.229

2 x 1NP: 1-NAPHTHOL(Non-covalent)(Covalent)

1NP.2: 8 residues within 4Å: Chain A: F.21, F.81, K.106, H.108, F.142, H.149, Y.240, M.248 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.21, A:F.21, A:Y.240 Hydrogen bonds: A:K.106 Water bridges: A:T.51, A:T.51 pi-Stacking: A:F.81, A:F.142, A:F.142 1NP.3: 10 residues within 4Å: Chain A: A.129, R.130, N.131, W.172, F.192, E.194, Y.280, K.290, F.291, R.292 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:A.129, A:N.131, A:W.172, A:W.172, A:F.192, A:F.192, A:F.291, A:F.291, A:F.291 Hydrogen bonds: A:A.129 Water bridges: A:R.292

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 3 residues within 4Å: Chain A: D.214, I.215, P.216 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:I.215 Water bridges: A:E.217 GOL.5: 4 residues within 4Å: Chain A: D.59, N.63, K.69, R.72 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.59, A:N.63, A:R.72 Water bridges: A:K.69, A:K.69, A:R.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Teramoto, T. et al., Structural basis for the broad range substrate specificity of a novel mouse cytosolic sulfotransferase--mSULT1D1. Biochem.Biophys.Res.Commun. (2009)

Release Date

2008-12-30

Peptides

Tyrosine-ester sulfotransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
X

Tyrosine-ester sulfotransferase

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