SMTL ID : 2zvu.1

Crystal structure of rat heme oxygenase-1 in complex with ferrous verdoheme

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x VEA: 5-OXA-PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

VEA.1: 17 residues within 4Å: Chain A: K.18, H.25, A.28, E.29, M.34, Q.38, Y.134, T.135, R.136, L.138, G.139, S.142, G.143, R.183, F.207, N.210, F.214 15 PLIP interactions: 14 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:A.28, A:E.29, A:M.34, A:Y.134, A:T.135, A:F.207, A:N.210, A:F.214 Hydrogen bonds: A:Y.134, A:Y.134 Salt bridges: A:K.18, A:K.18, A:R.183 Metal complexes: A:H.25, H2O.4

1 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 4 residues within 4Å: Chain A: V.24, R.27, L.208, I.211 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.27

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sato, H. et al., Crystal structure of rat haem oxygenase-1 in complex with ferrous verdohaem: presence of a hydrogen-bond network on the distal side. Biochem.J. (2009)

Release Date

2009-02-03

Peptides

Heme oxygenase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heme oxygenase 1

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