SMTL ID : 2zw4.2 (1 other biounit)

Crystal structure of bleomycin N-acetyltransferase complexed with coenzyme A in the orthorhombic crystal

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-dimer

Ligands

1 x COA: COENZYME A(Non-covalent)

COA.1: 21 residues within 4Å: Chain A: R.16, V.40, W.43, W.44, L.95, T.96, W.97, L.98, L.99, W.104, G.105, H.106, G.107, Y.108, A.109, T.110, N.137, R.139, S.140, V.143, R.146 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:W.44, A:L.99, A:A.109 Hydrogen bonds: A:R.16, A:W.97, A:L.99, A:G.105, A:H.106, A:G.107, A:Y.108, A:A.109, A:T.110, A:T.110, A:N.137, A:S.140, A:R.146 Salt bridges: A:R.146

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 8 residues within 4Å: Chain B: G.105, H.106, G.107, Y.108, A.109, T.110, V.143, R.146 11 PLIP interactions: 11 interactions with chain B Hydrogen bonds: B:G.105, B:H.106, B:G.107, B:Y.108, B:A.109, B:T.110, B:T.110, B:T.110 Water bridges: B:V.143, B:R.146 Salt bridges: B:R.146 SO4.3: 6 residues within 4Å: Chain A: A.184, V.185, P.231 Chain B: A.184, V.185, P.231 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:V.185, B:V.185 Water bridges: A:V.185, A:R.232, B:R.232 SO4.4: 4 residues within 4Å: Chain B: A.65, P.66, G.67, R.69 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:G.67 Salt bridges: B:R.69 SO4.5: 6 residues within 4Å: Chain B: W.44, T.96, W.97, W.132, I.133, S.140 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:W.97, B:S.140 Water bridges: B:N.137 SO4.6: 5 residues within 4Å: Chain B: H.33, D.37, R.100, R.101, D.102 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.37, B:R.101, B:D.102 Salt bridges: B:R.100, B:R.101

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oda, K. et al., Catalytic mechanism of bleomycin N-acetyltransferase proposed on the basis of its crystal structure. J.Biol.Chem. (2010)

Release Date

2009-11-03

Peptides

Bleomycin acetyltransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Bleomycin acetyltransferase

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