SMTL ID : 2zwm.1

Crystal structure of YycF receiver domain from Bacillus subtilis

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.105, R.107, E.108 Chain B: K.82 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:S.105, A:S.105, A:E.108 Salt bridges: A:R.107, B:K.82 SO4.2: 2 residues within 4Å: Chain A: K.114, R.118 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Salt bridges: A:K.114, A:R.118 Water bridges: B:E.85 SO4.3: 4 residues within 4Å: Chain A: K.82 Chain B: S.105, R.107, E.108 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Salt bridges: A:K.82, B:R.107 Hydrogen bonds: B:S.105, B:E.108 SO4.4: 2 residues within 4Å: Chain B: K.114, R.118 3 PLIP interactions: 3 interactions with chain B Water bridges: B:K.114 Salt bridges: B:K.114, B:R.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Doi, A. et al., Novel Antibiotics Target Protein of Gram-positive Pathogens: X-ray Crystal Structures and Search of Potential Drug-Binding sites. To be Published

Release Date

2009-07-14

Peptides

Transcriptional regulatory protein yycF: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulatory protein yycF