SMTL ID : 3a03.2 (1 other biounit)

Crystal structure of Hox11L1 homeodomain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

homo-dimer

Ligands

2 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: L.22, R.27, F.45, R.49 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.22, A:L.22, A:R.27, A:R.49 Water bridges: A:R.49 NA.4: 4 residues within 4Å: Chain B: L.22, R.27, F.45, R.49 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:L.22, B:L.22, B:R.27, B:R.49 Water bridges: B:R.49

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Y.21, R.49, R.53 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.21 Water bridges: A:Q.46, A:R.53 Salt bridges: A:R.49, A:R.53 SO4.3: 3 residues within 4Å: Chain A: R.15, E.26, A.29 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.26 Water bridges: A:R.15, A:R.15, A:R.15, A:R.18 Salt bridges: A:R.15 SO4.5: 3 residues within 4Å: Chain B: Y.21, R.49, R.53 6 PLIP interactions: 6 interactions with chain B Water bridges: B:Q.46, B:R.53, B:R.53, B:R.53 Salt bridges: B:R.49, B:R.53 SO4.6: 3 residues within 4Å: Chain B: R.15, E.26, A.29 5 PLIP interactions: 5 interactions with chain B Water bridges: B:R.15, B:R.15, B:R.15, B:R.18 Salt bridges: B:R.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyazono, K. et al., Cooperative DNA-binding and sequence-recognition mechanism of aristaless and clawless. Embo J. (2010)

Release Date

2010-03-09

Peptides

T-cell leukemia homeobox protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

T-cell leukemia homeobox protein 2

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