SMTL ID : 3a26.1

Crystal structure of P. horikoshii TYW2 in complex with MeSAdo

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x MTA: 5'-DEOXY-5'-METHYLTHIOADENOSINE(Non-covalent)

MTA.1: 14 residues within 4Å: Chain A: M.155, F.156, G.158, H.161, I.177, E.178, K.179, T.183, M.205, D.206, N.207, G.222, Y.223, F.230 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.179, A:D.206, A:N.207 Water bridges: A:K.179 pi-Stacking: A:F.156, A:F.156

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 4 residues within 4Å: Chain A: V.112, K.123, F.186, E.189 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.123, A:E.189, A:E.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Umitsu, M. et al., Structural basis of AdoMet-dependent aminocarboxypropyl transfer reaction catalyzed by tRNA-wybutosine synthesizing enzyme, TYW2. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-09-15

Peptides

Uncharacterized protein PH0793: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uncharacterized protein PH0793

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