SMTL ID : 3a4p.1

human c-MET kinase domain complexed with 6-benzyloxyquinoline inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.54 Å

Oligo State

monomer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 7 residues within 4Å: Chain A: T.136, V.137, K.138, I.304, G.305, E.306, H.307 Ligand excluded by PLIP

2 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.2: 6 residues within 4Å: Chain A: D.123, R.167, N.168, Y.189, D.190 Ligands: DFQ.4 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.167, A:R.167, A:Y.189 IPA.3: 4 residues within 4Å: Chain A: Q.263, D.269, Y.272, E.273 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.272, A:E.273

1 x DFQ: (2E)-3-{6-[(1R)-1-(2,6-dichloro-3-fluorophenyl)ethoxy]quinolin-3-yl}-N-methylprop-2-enamide(Non-covalent)

DFQ.4: 18 residues within 4Å: Chain A: I.43, V.51, A.67, L.99, L.116, P.117, Y.118, M.119, K.120, H.121, G.122, R.167, N.168, M.170, A.180, D.181, Y.189 Ligands: IPA.2 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.43, A:V.51, A:A.67, A:Y.118 Hydrogen bonds: A:M.119, A:K.120 pi-Stacking: A:Y.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nishii, H. et al., Discovery of 6-benzyloxyquinolines as c-Met selective kinase inhibitors. Bioorg.Med.Chem.Lett. (2010)

Release Date

2010-02-16

Peptides

Hepatocyte growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Hepatocyte growth factor receptor