SMTL ID : 3a59.6 (5 other biounits)

Structure of Hemoglobin from flightless bird (Struthio camelus)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.41 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 17 residues within 4Å: Chain A: M.32, F.43, H.45, F.46, H.58, K.61, V.62, A.65, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, L.136 18 PLIP interactions: 18 interactions with chain A, Hydrophobic interactions: A:F.43, A:F.43, A:K.61, A:K.61, A:V.62, A:L.83, A:L.83, A:L.86, A:L.91, A:V.93, A:L.101, A:L.101, A:L.101, A:L.136 Salt bridges: A:H.45, A:H.58, A:K.61 Metal complexes: A:H.87 HEM.2: 17 residues within 4Å: Chain B: F.41, F.42, F.45, H.63, K.66, V.67, S.70, F.71, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 16 PLIP interactions: 16 interactions with chain B, Hydrophobic interactions: B:F.42, B:F.42, B:V.67, B:V.67, B:F.71, B:F.71, B:L.88, B:L.91, B:L.96, B:V.98, B:N.102, B:L.106, B:L.141 Salt bridges: B:K.66 pi-Cation interactions: B:H.63 Metal complexes: B:H.92 HEM.3: 15 residues within 4Å: Chain C: Y.42, F.43, H.45, H.58, K.61, V.62, A.65, L.86, H.87, L.91, V.93, N.97, F.98, V.132, L.136 20 PLIP interactions: 20 interactions with chain C, Hydrophobic interactions: C:Y.42, C:K.61, C:K.61, C:V.62, C:A.65, C:L.86, C:L.91, C:L.91, C:V.93, C:V.93, C:F.98, C:F.98, C:V.132, C:L.136 Salt bridges: C:H.45, C:K.61, C:K.61 pi-Stacking: C:H.58, C:H.58 Metal complexes: C:H.87 HEM.4: 16 residues within 4Å: Chain D: F.41, F.42, H.63, K.66, V.67, S.70, F.71, L.88, L.91, H.92, L.96, V.98, N.102, F.103, L.106, L.141 17 PLIP interactions: 17 interactions with chain D, Hydrophobic interactions: D:F.41, D:F.41, D:F.42, D:F.42, D:V.67, D:L.88, D:L.88, D:L.96, D:V.98, D:N.102, D:F.103, D:F.103, D:L.106 Salt bridges: D:H.63, D:H.63 pi-Stacking: D:H.63 Metal complexes: D:H.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jaimohan, S.M. et al., Structure of Hemoglobin from flightless bird (Struthio camelus). to be published

Release Date

2009-08-18

Peptides

Hemoglobin subunit alpha-A: AC
Hemoglobin subunit beta: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
G

B
F

D
H

Hemoglobin subunit alpha-A

Hemoglobin subunit beta

Related Entries With Identical Sequence