SMTL ID : 3a5f.1

High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.19 Å

Oligo State

homo-tetramer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: T.254, N.257, D.265, L.266 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:N.257, A:L.266 Water bridges: A:T.254, A:G.264, A:D.265, A:E.272 GOL.2: 5 residues within 4Å: Chain B: T.254, N.257, D.265, L.266, E.272 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.257, B:L.266 Water bridges: B:T.254, B:G.264, B:D.265, B:E.272, B:E.272 GOL.3: 4 residues within 4Å: Chain C: T.254, N.257, D.265, L.266 7 PLIP interactions: 7 interactions with chain C Hydrogen bonds: C:N.257, C:D.265, C:L.266 Water bridges: C:T.254, C:G.264, C:D.265, C:E.272 GOL.4: 5 residues within 4Å: Chain D: T.254, N.257, D.265, L.266, E.272 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:N.257, D:D.265, D:L.266 Water bridges: D:T.254, D:G.264, D:D.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dobson, R.C.J. et al., The high resolution structure of DHDPS from Clostridium botulinum. To be Published

Release Date

2010-06-30

Peptides

Dihydrodipicolinate synthase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Dihydrodipicolinate synthase

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