- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 6 x ZN: ZINC ION(Non-covalent)
ZN.2: 6 residues within 4Å:- Chain A: H.36, D.45, H.178, E.183
- Ligands: MN.1, CAC.3
4 PLIP interactions:4 interactions with chain A- Metal complexes: A:H.36, A:D.45, A:E.183, A:E.183
ZN.5: 6 residues within 4Å:- Chain B: H.36, D.45, H.178, E.183
- Ligands: MN.4, CAC.6
4 PLIP interactions:4 interactions with chain B- Metal complexes: B:H.36, B:D.45, B:E.183, B:E.183
ZN.8: 6 residues within 4Å:- Chain C: H.36, D.45, H.178, E.183
- Ligands: MN.7, CAC.9
4 PLIP interactions:4 interactions with chain C- Metal complexes: C:H.36, C:D.45, C:E.183, C:E.183
ZN.11: 6 residues within 4Å:- Chain D: H.36, D.45, H.178, E.183
- Ligands: MN.10, CAC.12
4 PLIP interactions:4 interactions with chain D- Metal complexes: D:H.36, D:D.45, D:E.183, D:E.183
ZN.14: 6 residues within 4Å:- Chain E: H.36, D.45, H.178, E.183
- Ligands: MN.13, CAC.15
4 PLIP interactions:4 interactions with chain E- Metal complexes: E:H.36, E:D.45, E:E.183, E:E.183
ZN.17: 6 residues within 4Å:- Chain F: H.36, D.45, H.178, E.183
- Ligands: MN.16, CAC.18
4 PLIP interactions:4 interactions with chain F- Metal complexes: F:H.36, F:D.45, F:E.183, F:E.183
- 6 x CAC: CACODYLATE ION(Non-covalent)
CAC.3: 14 residues within 4Å:- Chain A: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.1, ZN.2
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.121, A:H.178
CAC.6: 14 residues within 4Å:- Chain B: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.4, ZN.5
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.121, B:H.178
CAC.9: 14 residues within 4Å:- Chain C: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.7, ZN.8
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Y.121
CAC.12: 14 residues within 4Å:- Chain D: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.10, ZN.11
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:Y.121, D:H.178
CAC.15: 14 residues within 4Å:- Chain E: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.13, ZN.14
2 PLIP interactions:2 interactions with chain E- Hydrogen bonds: E:Y.121, E:H.178
CAC.18: 14 residues within 4Å:- Chain F: E.34, H.36, D.45, S.78, G.119, H.120, Y.121, E.122, W.154, E.177, H.178, E.183
- Ligands: MN.16, ZN.17
1 PLIP interactions:1 interactions with chain F- Hydrogen bonds: F:Y.121
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamashita, K. et al., Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase. J.Mol.Biol. (2010)
- Release Date
- 2010-02-09
- Peptides
- Creatinine amidohydrolase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 6 x ZN: ZINC ION(Non-covalent)
- 6 x CAC: CACODYLATE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yamashita, K. et al., Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase. J.Mol.Biol. (2010)
- Release Date
- 2010-02-09
- Peptides
- Creatinine amidohydrolase: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
F