SMTL ID : 3a7a.2 (1 other biounit)

Crystal structure of E. coli lipoate-protein ligase A in complex with octyl-amp and apoH-protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x OCT: N-OCTANE(Non-covalent)

OCT.1: 9 residues within 4Å: Chain A: W.37, R.70, G.75, V.77, G.136, S.137, A.138, H.149 Ligands: AMP.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.37, A:V.77, A:A.138

1 x AMP: ADENOSINE MONOPHOSPHATE(Non-covalent)

AMP.2: 18 residues within 4Å: Chain A: G.75, A.76, V.77, F.78, H.79, N.83, K.133, G.136, T.151, L.153, L.161, L.165, S.179, V.180, R.181, S.182, V.184 Ligands: OCT.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:G.75, A:A.76, A:F.78, A:N.83, A:K.133, A:V.180, A:S.182 Salt bridges: A:K.133

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fujiwara, K. et al., Global conformational change associated with the two-step reaction catalyzed by Escherichia coli lipoate-protein ligase A. J.Biol.Chem. (2010)

Release Date

2010-01-19

Peptides

Lipoate-protein ligase A: A
Glycine cleavage system H protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Lipoate-protein ligase A

Glycine cleavage system H protein

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