SMTL ID : 3a8e.1

The structure of AxCesD octamer complexed with cellopentaose

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-octamer

Ligands

6 x BGC- BGC- BGC- BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC-BGC-BGC-BGC.1: 22 residues within 4Å: Chain A: N.61, A.62, A.65, L.66 Chain B: K.6, D.9, T.11, Q.92 Chain E: N.61, A.62, A.65, L.66, I.67 Chain F: K.6, D.9, T.11, Q.15 Ligands: BGC-BGC-BGC-BGC-BGC.4, BGC-BGC-BGC-BGC-BGC.4, BGC-BGC-BGC-BGC-BGC.4, BGC-BGC-BGC-BGC-BGC.4, BGC-BGC-BGC-BGC-BGC.4 2 PLIP interactions: 2 interactions with chain F Hydrogen bonds: F:Q.15, F:Q.15 BGC-BGC-BGC-BGC-BGC.2: 17 residues within 4Å: Chain A: K.6, D.9, T.11, Q.15 Chain B: A.62, A.65, L.66, I.67 Chain C: K.7, A.62, A.65, L.66 Chain D: K.6, K.7, D.9, T.11, Q.92 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain C Hydrogen bonds: A:T.11, A:Q.15, C:A.62 BGC-BGC-BGC-BGC-BGC.3: 21 residues within 4Å: Chain C: K.6, D.9, T.11, Q.15 Chain D: A.62, A.65, L.66, I.67 Chain G: K.6, K.7, D.9, T.11, Q.92 Chain H: A.62, A.65, L.66 Ligands: BGC-BGC-BGC-BGC-BGC.6, BGC-BGC-BGC-BGC-BGC.6, BGC-BGC-BGC-BGC-BGC.6, BGC-BGC-BGC-BGC-BGC.6, BGC-BGC-BGC-BGC-BGC.6 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:T.11, C:Q.15, C:Q.15 BGC-BGC-BGC-BGC-BGC.4: 22 residues within 4Å: Chain A: N.61, A.62, A.65, L.66, I.67 Chain B: K.6, D.9, T.11, Q.15 Chain E: N.61, A.62, A.65, L.66 Chain F: K.6, D.9, T.11, Q.92 Ligands: BGC-BGC-BGC-BGC-BGC.1, BGC-BGC-BGC-BGC-BGC.1, BGC-BGC-BGC-BGC-BGC.1, BGC-BGC-BGC-BGC-BGC.1, BGC-BGC-BGC-BGC-BGC.1 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:Q.15, B:Q.15 BGC-BGC-BGC-BGC-BGC.5: 17 residues within 4Å: Chain E: K.6, D.9, T.11, Q.15 Chain F: A.62, A.65, L.66, I.67 Chain G: K.7, A.62, A.65, L.66 Chain H: K.6, K.7, D.9, T.11, Q.92 3 PLIP interactions: 2 interactions with chain E, 1 interactions with chain G Hydrogen bonds: E:T.11, E:Q.15, G:A.62 BGC-BGC-BGC-BGC-BGC.6: 21 residues within 4Å: Chain C: K.6, K.7, D.9, T.11, Q.92 Chain D: A.62, A.65, L.66 Chain G: K.6, D.9, T.11, Q.15 Chain H: A.62, A.65, L.66, I.67 Ligands: BGC-BGC-BGC-BGC-BGC.3, BGC-BGC-BGC-BGC-BGC.3, BGC-BGC-BGC-BGC-BGC.3, BGC-BGC-BGC-BGC-BGC.3, BGC-BGC-BGC-BGC-BGC.3 3 PLIP interactions: 3 interactions with chain G Hydrogen bonds: G:T.11, G:Q.15, G:Q.15

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, S.Q. et al., Structure of bacterial cellulose synthase subunit D octamer with four inner passageways. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-09-22

Peptides

Cellulose synthase operon protein D: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
A

F
B

G
C

H
D

Cellulose synthase operon protein D

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