SMTL ID : 3a8i.3 (3 other biounits)

Crystal Structure of ET-EHred-5-CH3-THF complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x C2F: 5-METHYL-5,6,7,8-TETRAHYDROFOLIC ACID(Non-covalent)

C2F.1: 17 residues within 4Å: Chain A: M.52, Y.85, D.98, L.99, I.100, Y.102, V.112, N.114, F.174, T.187, G.188, Y.189, E.196, R.224, M.233, W.253 Ligands: PO4.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.100, A:Y.189, A:M.233, A:W.253 Hydrogen bonds: A:D.98, A:I.100, A:Y.102, A:V.112, A:T.187, A:T.187, A:R.224 Water bridges: A:R.224 Salt bridges: A:E.196

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: F.21, H.51, M.52, N.114, S.115, R.224, L.235 Ligands: C2F.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.115 Water bridges: A:A.116 Salt bridges: A:H.51, A:R.224

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Okamura-Ikeda, K. et al., Crystal structure of aminomethyltransferase in complex with dihydrolipoyl-H-protein of the glycine cleavage system: implications for recognition of lipoyl protein substrate, disease-related mutations, and reaction mechanism. J.Biol.Chem. (2010)

Release Date

2010-04-07

Peptides

Aminomethyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Aminomethyltransferase

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