SMTL ID : 3acg.1

Crystal Structure of Carbohydrate-Binding Module Family 28 from Clostridium josui Cel5A in complex with cellobiose

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x BGC- BGC: beta-D-glucopyranose-(1-4)-beta-D-glucopyranose(Non-covalent)

BGC-BGC.1: 5 residues within 4Å: Chain A: D.76, W.78, R.83, W.129, Q.131 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.76, A:Q.131, A:Q.131, A:Q.131 Water bridges: A:W.78, A:W.78, A:S.118, A:N.166

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: T.31, E.33, S.60, K.61, D.198 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:T.31, A:E.33, A:K.61, A:D.198, H2O.3

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 1 residues within 4Å: Chain A: R.11 2 PLIP interactions: 2 interactions with chain A Water bridges: A:R.11, A:R.11 PO4.4: 3 residues within 4Å: Chain A: E.15, S.50, A.51 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.15, A:A.51 Water bridges: A:E.15, A:E.15

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 6 residues within 4Å: Chain A: V.48, V.67, K.68, Y.69, P.70, S.80 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.80 Water bridges: A:Q.49, A:K.68, A:K.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsukimoto, K. et al., Recognition of cellooligosaccharides by a family 28 carbohydrate-binding module. Febs Lett. (2010)

Release Date

2010-03-02

Peptides

Beta-1,4-endoglucanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-1,4-endoglucanase

Related Entries With Identical Sequence