SMTL ID : 3acl.1

Crystal Structure of Human Pirin in complex with Triphenyl Compound

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x FE2: FE (II) ION(Non-covalent)

FE2.1: 4 residues within 4Å: Chain A: H.62, H.64, H.107, E.109 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.62, A:H.64, A:H.107, A:E.109, H2O.1, H2O.1

1 x 3F1: N-{[4-(benzyloxy)phenyl](methyl)-lambda~4~-sulfanylidene}-4-methylbenzenesulfonamide(Non-covalent)

3F1.2: 17 residues within 4Å: Chain A: L.47, D.49, F.51, F.59, P.60, H.62, H.64, S.71, Y.72, L.73, M.79, M.91, E.109, G.119, L.120, Q.121, W.123 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:D.49, A:F.51, A:F.59, A:H.62, A:L.73, A:M.79, A:Q.121 Salt bridges: A:D.49 pi-Stacking: A:F.59, A:H.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyazaki, I. et al., A small-molecule inhibitor shows that pirin regulates migration of melanoma cells. Nat.Chem.Biol. (2010)

Release Date

2010-08-18

Peptides

Pirin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pirin