SMTL ID : 3adp.1

Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase (NADH Form)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x NAI: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE(Non-covalent)

NAI.1: 22 residues within 4Å: Chain A: G.13, S.14, G.15, L.16, V.17, Y.35, D.36, I.37, Q.41, C.94, V.95, P.96, E.97, L.101, K.102, I.105, S.122, S.123, S.124, H.145, P.146, N.148 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.17, A:P.146 Hydrogen bonds: A:S.14, A:L.16, A:V.17, A:I.37, A:Q.41, A:E.97, A:K.102, A:K.102, A:S.124, A:N.148 Water bridges: A:G.15, A:L.16, A:G.18, A:K.104, A:Q.108 NAI.2: 22 residues within 4Å: Chain B: G.13, S.14, G.15, L.16, V.17, Y.35, D.36, I.37, Q.41, C.94, V.95, P.96, E.97, L.101, K.102, I.105, S.122, S.123, S.124, H.145, P.146, N.148 16 PLIP interactions: 16 interactions with chain B Hydrophobic interactions: B:V.17, B:P.146 Hydrogen bonds: B:S.14, B:L.16, B:V.17, B:I.37, B:Q.41, B:K.102, B:K.102, B:S.124, B:N.148 Water bridges: B:G.15, B:L.16, B:G.18, B:K.104, B:Q.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Asada, Y. et al., Crystal Structure of the Rabbit L-Gulonate 3-Dehydrogenase. To be Published

Release Date

2010-02-09

Peptides

Lambda-crystallin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Lambda-crystallin

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